For Glycan Modeling & Simulation
Home
Glycan Reader
Glycan Modeler
Glycolipid Modeler
LPS Modeler
GFDB
GlyMDB
GBSDB
GBS-predictor
GS-align
GFDB
About
Search
How To Use
Reference
Search Glycan Fragment DB
Last update: 01/11/2019
Filter:
By Type:
N-linked
O-linked
ligand
By PDB Info:
Resolution
Å
Method
X-ray
NMR
Only after year
Exclude entries with:
Distorted ring geometry
Sequence similarity
100%
95%
90%
80%
70%
60%
50%
40%
30%
Search Sequence:
Any
Reducing End
ASN
SER
THR
PI-DAG
DAG
CER
DPHG
*
α
β
D-NA-glucose
D-NA-galactose
D-glucosamine
D-glucose
D-galactose
D-mannose
D-altrose
D-allose
D-glucuronic acid
D-galacturonic acid
L-iduronic acid
D-sialic acid
Kdo
D-quinovose
D-fructose
D-ribose
D-xylose
L-gly-D-ManHep
L-rhamnose
L-fucose
Chemical modification:
Residue ID
Site
Modification
Any
Any
1
2
3
4
6
Any
None
sulfation
N-sulfation
N-acetylation
O-acetylation
amylation
phosphorylation
methylation
deoxylation
acylation(octyl)
fluorine
isopropyl-thio
pyrophosphate
Glycan Reader Sequence format:
Sequence Graph:
E-mail (optional):
In the case that you have any difficulties in viewing the result or to keep the results, you can generate an archived report file. The report file contains raw data for all torsion angles and clustering results. See "How To Use" for more information. If e-mail address is provided, the generated report will be sent to the e-mail address as well.
Search Result:
Use "Search Sequence" button to search the torsion angles.
1 ←
2 ←
3 ←
4 ←
5
6 ←
7
*
α
β
D-NA-glucose
D-glucosamine
D-glucose
D-mannose
D-altrose
D-allose
D-NA-galactose
D-galactose
D-galacturonic acid
D-glucuronic acid
L-iduronic acid
D-sialic acid
Kdo
D-quinovose
D-fructose
D-ribose
D-xylose
L-gly-D-Manhep
L-rhamnose
L-fucose